地卷属1中国新记录种

2016-08-06 05:37牛东玲王忠忠白明生郑学平
西北植物学报 2016年6期
关键词:宁夏大学银川

牛东玲, 朱 强 , 王忠忠 , 石 晶 , 白明生 , 郑学平

(1 宁夏大学 生命科学学院,银川 750021;2 宁夏林业研究所,银川 750000)



地卷属1中国新记录种

牛东玲1, 朱强2, 王忠忠1, 石晶1, 白明生1, 郑学平1

(1 宁夏大学 生命科学学院,银川 750021;2 宁夏林业研究所,银川 750000)

摘要:通过对地卷属地衣形态和化学的研究,并结合核基因ITS序列的系统发育分析,报道了采自中国西北地区地卷属的1个中国新记录种——芽片地卷(新拟)。它的典型特征是沿着地衣体边缘或地衣体上表面裂隙具有大量的薄片状phyllidia,且常常覆有粉霜。地衣体上表面的边缘具有白色绒毛,下表面具有丛生假根,而且假根在边缘为白色,逐渐向中心变为深色。该研究提供了该种的详细描述,并与近缘种进行了细致的讨论。

关键词:中国西北; 地卷属; ITS序列;新记录种;

The genusPeltigerais cosmopolitan monophyletic genus with more than 91 species, which typically have muscicolous and terricolous foliose thallus[1-3]. Most ofPeltigeraspecies have a cyanobacterial photoboint that carries out nitrogen fixation and plays a major ecological role in nitrogen cycling of ecosystem. This genus is a common lichen group represented by 28 taxa in China[4-5], distributed in all geographical distributions of China. However, until now this genus is not studied thoroughly in China, in which the potential for finding new species is high. During our recent fieldwork in Liupanshan and Helanshan Mountains located in the northwest of China, we find one additional taxa (PeltigeramonticolaVitik.) belonging to this genus based on morphology and molecular characters.

1Materials and methods

1.1Morphological analysis

Specimens for this study were collected from Liupanshan and Helanshan Mountains, located in the northwest of China. The morphological descriptions were made from dry materials. Morphological and anatomical characters were observed and photographed using a XTS20 (Fukai Science and Technology Development Co., China) and Leica DM2500 (Leica instrument Co., Germany). The voucher specimens for this study were kept in the herbarium of College of Life Science of Ningxia University (NXAC, Yinchuan, Ningxia, China). Besides our own collection we examined the specimens of the same species deposited in William Louis & Chicita F. Culbertson Lichen Herbarium & Library (Duke University, Durham, NC, USA)

1.2Chemical analysis

Chemical analyses were carried out using spot test[6]. These involve applying tiny amounts of a reagent to lichen and observing any resulting color change. Four reagents were used in these spot tests, K (10% aqueous potassium hydroxide), C (sodium hypochlorite solution), KC (10% K followed by C solution), P (5% alcoholic P-phenylenediamine).

1.3Molecular analysis

DNA was obtained from dry samples. Extraction followed a modification of DOYLE and DOYLE’s (1987) method[7-8]. rDNA internal transcribed spacers (ITS1-2) were amplified via polymerase chain reaction (PCR) using following primers: ITS1F[9]and ITS4[10]. PCR mixtures (25 μL) consisted of 25 μg BSA, 1 UTaqDNA polymerase, dNTPs (0.2 mmol/L), primers (0.5 μmol/L each), and PCR buffer, adjusted with H2O to 25 μL. The following thermal cycler profile was employed for PCR reactions: an initial denaturation of 95 ℃ for 5 min, follow by 35 cycles of 95 ℃ for 45 s, 52 ℃ for 90 s, and 72 ℃ for 90 s, with a final extension of 72 ℃ for 10 min. Amplification products were cleaned with ExoAP and sequenced using Big Dye chemistry with an ABI 3730 automated sequencer (PE Applied Biosystems, USA). Sequences were assembled using Sequencher 4.2 (Gene Codes, USA). All newly obtained sequences were subjected to Blast searches to verify their identity and submitted to GenBank.

Table 1 Voucher information of Peltigera monticola Vitik. samples with GenBank accession number and specimens from GenBank ITS sequences obtained

*Specimen name followed by an asterisk represents outgroup sequence.

1.4Phylogenetic analysis

The entire ITS sequences of 6 samples examined and 14 representatives selected (Table 1) were aligned by Muscle implemented inMEGAversion 6[11]. The alignments were analyzed using neighbor joining (NJ), the software-based Kimura 2-parameter model was used, and gaps were excluded in the pairwise distance estimation, the support values were tested by 1 000 bootstrap replications.

2Results and discussion

2.1Phylogenetic analyses

Sequences of ITS alone were sufficient to identify all species from thePeltigeracaninaspecies complex. TheP.ponojensisgroup was well defined as a monophyletic clade (Fig.1), which has been identified before[12]. ITS sequences of representative collections showed that all studiedPeltigeraspecies from Liupanshan and Helanshan Mountains, belonged to the speciesP.monticolaclade, support for the monophyly of this taxon was strong (BS=78%). The specimens in different geographical region were in different lineages, the specimens from Liupanshan were in a lineage, those from Helanshan in another lineage. ‘P.scotteri’ is a nonmonophyletic putative species, and one of the specimens has been proved sister toP.monicola, so ‘P.scotteri’ is not validly published[13]. The specimen of ‘P.scotteri’ from Canade (Table 1) belonged to Helanshan lineage, which means this ‘P.scotteri’ should be treated as a member ofP.monticola. The specimens from Liupanshan were sister to the specimens from Poland with high support (BS=99%), the specimens from Helanshan and Switzerland were delimited as a monophyletic entity (BS=97%). Sequence data were also compared using Blast analysis of ITS1-2 regions deposited in NCBI. They were 100 % identical toPeltigeramonticola.

2.2The species

PeltigeramonticolaVitik., Acta Bot. Fennica 152: 64 (1994,Fig. 2)

Thallus: foliose, small to medium-sized, 3-9 cm in diam., adnate; lobes: flattened and elongate, 0.5-3 cm long and 1-3 mm wide, with up-turned, curled, with numerous flat phyllidia; upper surface: gray, partially brown when dry, tomentose marginally, dull marginally, smooth forwards central, sometimes pruinose on the surface; phyllidia: flat squamulose along margins and cracks, often pruinose; medulla: white with interwoven hyphae; photobiont: nostoc; lower surface: white margin with white raised veins, brown towards center; rhizines: tufted, pale near margins,darkened towards center; apothecia: not seen, said to be flat or saddle-shaped, up to 5 mm in diam.; pycnidia: not seen.

Support is indicated for branches by bootstrap frequencies exceeding 50% under the Neighbor JoiningFig. 1 Phylogenetic tree of P. monticola and selected species of P. ponojensis group based on ITS nrDNA

A. general habit; B. marginal phyllidia with pruinose; C. pruinose on the surface; D. tufted rhizinesFig.2 Peltigera monticola.

Chemistry: spot tests on the cortex and medulla K-, C-, KC-, P-.

Ecology and Distribution:P.monticolamainly grows among mosses over soil. Its world distribution includes North America, Europe and Asia[14]. At present this species is mainly recorded from Liupanshan which is located in Ningxia and Helanshan which is located in Ningxia and Inner Mongolia from the Northwest of China. Furthermore, it is mainly collected from forest zones in Nature Reserve of Ningxia and Inner Mongolia.

Notes: ITS results indicate that this taxon from the northwest of China is comprised of two geographically distinct lineages, but there is no obvious morphological difference between them, so two geographical populations ofP.monticolaare treated here as a taxon. The population from the northwest of China is sister to the specimens from Europe (Poland and Switzerland) with high support. We speculate it is due to their similar climatic conditions.P.monticolais identified by its laminal phyllidia along the margin or cracks, lobe ends with grey-whitish tomentose, tufted rhizines. The species is close toP.ponojenisbasing on GenBank Blast, but the latter is distinguished by short of phyllidia and pale unbranched to fibrous, discrete rhizines.

Specimens examined: China, Prov. Ningxia, Guyuan, Liupanshan, Qiuqianjia, 1 718 m, on moss, 2012, 12-0016; Liupanshan, Erlonghe, 2 039 m, on moss, 2012, 12-0017; Helanshan, Suyukou, 2 086 m, on moss, 2013,13-0005; 13-0004; Prov. Inner Mongolia: Helanshan, South Temple, 2 000 m, on moss, 2013, 13-0002; 13-0003. -(specimens are deposited in NXAC). France: Lorraine, La Madeleine, Fusboesch, 345 m, on soil, 2008, 07.27.02/8.- (specimens are deposited in Duke University Herbarium).

References:

[1]SERUSIAUX E B, MIADLIKOWSKA G J, VITIKAINEN O. Taxonomy, phylogeny biogeography of the lichen genusPeltigerain Papua New Guinea[J].FungalDiversity, 2009, 38: 185-224.

[2]HAN L F, ZHANG Y Y, GUO S Y.Peltigerawulingensis, a new lichen (Ascomycota) from north China [J].Lichenologist, 2013, 45: 329-336.

[3]MIADLIKOWSKA J, RICHARDSON D, MAGAIN N,etal. Phylogenetic placement, species delimitation, and cyanobiont identity of endangered aquaticPeltigeraspecies (Lichen-forming Ascomycota, Lecanoromycetes)[J].AmericanJournalofBotany, 2014, 101(7): 1 141-1 156.

[4]HAN L F, ZHENG T X, GUO S Y. A new species in the lichen genusPeltigerafrom northern China based on morphology and DNA sequence data[J].TheBryologist, 2015, 118(1): 46-53.

[5]WU J N, LIU H J. Flora Lichenum Sinicorum, Vol.11, Peltigerales (I)[M]. 1th ed. Beijing: Science Press, 2012.

[6]BRODO I M, SHARNOFF S D, SHARNOFF S. Lichens of North America[M]. 1th ed. New Haven and London: Yale University Press, 2001; 103-108.

[7]DOYLE J J, DOYLE J L. A rapid DNA isolation procedure for small quantities of fresh leaf tissue[J].PhytochemistryBull, 1987, 19: 11-15.

[8]GOFFINTE B, BAYER R J, VITT D H. Circumscription and phylogeny of the Orthotrichales (Musci) based onrbcL sequences[J].AmericanJournalofBotany, 1998, 85: 1 324-1 337.

[9]GARDES M, BRUNS T D. ITS primers with enhanced specificity for basidiomycetes—application to the identification of mycorrhizae and rusts [J].MolecularEcology, 1993, 2: 113-118.

[10]WHITE T, BRUNS T D, LEE S,etal. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics[M]// M A Innis, D H Gelfand, J J Sninsky,etal: PCR Protocols: a guide to methods and applications. New York: Academic Press Inc, 1990, 315-322.

[11]TAMURA K, STECHER G, PETERSON D,etal. MEGA6: molecular evolutionary genetics analysis version 6.0[J].MolecularBiologyandEvolution, 2013,30: 2 725-2 729.

[12]MIADLIKOWSKA J, LUTZONI F, GOWARD T,etal. New approach to an old problem: Incorporating singnal from gap-rich regions of ITS and rDNA large subunit into phylogenetic analyses to resolve thePeltigeracaninaspecies complex [J].Mycologia, 2003, 95: 1 181-1 203.

[13]MIADLIKOWSKA J and LUTZONI F. Phylogenetic revision of the genus Peltigera (Lichen-forming Ascomycota) based on morphological, chemical, and large submit nuclear ribosomal DNA data[J].InternationalJournalofPlantScience, 2000, 16(6): 925-958.

[14]NASH III, T H, RYAN B D, GRIES C,etal. Lichen Flora of the Greater Sonoran Desert Region[M]. VII. America: Thomson-Shore Inc, 2002, 389-398.

(编辑:潘新社)

文章编号:1000-4025(2016)06-1245-05

doi:10.7606/j.issn.1000-4025.2016.06.1245

收稿日期:2016-03-10;修改稿收到日期:2016-05-11

基金项目:国家自然科学基金(31360040)

作者简介:牛东玲(1973- ),女,博士,教授,主要从事植物分类及植物化学研究。E-mail: niudl@nxu.edu.cn

中图分类号:Q949.34

文献标志码:A

New Record of the Lichen GenusPeltigerafrom China

NIU Dongling1, ZHU Qiang2, WANG Zhongzhong1, SHI Jing1,BAI Mingsheng1, ZHENG Xueping1

(1 Life Science School, Ningxia University, Yinchuan 750021, China; 2. Ningxia Forest Research Institution, Yinchuan 750000, China)

Abstract:A new record species Peltigera monticola Vitik. was identified from the northwest of China, based on morphological and chemical analysis, and a phylgenetic analysis of nrDNA ITS sequence was also carried out. It was distinguished by its numerous laminal phyllidia, often pruinose, along the margin or cracks, marginal parts tomentose, tufted rhizomes with pale near margins and darkened towards center. Detailed description and discussion with allied species were provided.

Key words:northwest of China; Peltigera; ITS sequences; new record species

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