Mehtab Parveen.Faheem Ahmad.Ali Mohammed Malla.Shaista Azaz.Mahboob Alam.Omer A.Basudan.Manuela Ramos Silva.Pedro S.Pereira Silva
ORIGINAL ARTICLE
Acetylcholinesterase and Cytotoxic Activity of Chemical Constituents of Clutia lanceolata Leaves and its Molecular Docking Study
Mehtab Parveen.Faheem Ahmad.Ali Mohammed Malla.Shaista Azaz.Mahboob Alam.Omer A.Basudan.Manuela Ramos Silva.Pedro S.Pereira Silva
Phytochemical investigations of the ethanolic extract of leaves of Clutia lanceolata(Family:Euphorbiaceae)resulted in the isolation of four compounds viz.3,4-dihydroxy-2-methylbenzoic acid(1),2,2′-dihydroxy-1,1′-binaphthyl(2),1,3,8-trihydroxy-6-methylanthracene-9,10-dione(3)and 5-hydroxy-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,4,6-trien-3-one(4).Although all the isolated compounds were known but this was the first report from this plant source.Their structures were established on the basis of chemical and physical evidences viz.elemental analysis,FT-IR,1H-NMR,13CNMR and mass spectral analysis.Structure of compound2and4was further authenticated by single-crystal X-ray analysis and density functional theory calculations.The isolated compounds(1–4)were screened for AChE enzyme inhibition assay in which compound3and4were found to be more potent AChE inhibitor.Molecular docking study of potent AChE inhibitor was performed to find the probable binding mode of the compounds into the active site of receptor.Moreover,the isolated compounds were also screened for in vivo cytotoxicity by brine shrimp lethality assay.
Graphical Abstract
Clutia lanceolata⋅X-ray crystallography⋅AChE ⋅Molecular docking⋅Cytotoxicity
Clutia is a genus of plants belongs to the family Euphorbiaceae and is native to sub-Saharan Africa and the Arabian Peninsula.Ethnobotanical studies have uncovered several Clutia species which are widely used in folk medicine and have potential medicinal value[1].The phytochemical constituents of the genus Clutia have not been investigated extensively,only few species have been explored phytochemically viz C.richardiana[2–7],C.abyssinica[8–10],C.robusta[11]and C.similis[12]etc.In this context,Clutia lanceolata,a woody herb or shrub or sometime grown up to tree belonging to the family Euphorbiaceae,is also relatively unexplored.Baka in 2010 showed the antifungal property of the aqueous extracts of its leaves[13]and Mossa et al.reported the hypoglycaemic property of C.lanceolata[14].As part of our research work to explore the phytochemical and biological profile of medicinal plants[15,16],we have carried out the phytochemical analysis of the leaves of C.lanceolata.The present paper reported the isolation,characterization,X-ray crystallographic study and biological activity of four compounds i.e.3,4-dihydroxy-2-methylbenzoic acid(1),2,2′-dihydroxy-1,1′-binaphthyl (2), 1,3,8-trihydroxy-6-methylanthracene-9,10-dione,Emodin(3)and 5-hydroxy-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,4,6-trien-3-one,curcumin(4),isolated from the ethanolic extract of C.lanceolata leaves(Fig.1).The structure of all the isolated phytoconstituents was established on the basis of physical and chemical data(IR,1H-NMR,13C-NMR,and MS spectral analysis).However,the structure of compounds2and4was further authenticated with X-ray crystallographic analysis.To the best of our knowledge,these four compounds have not been reported from this plant source.Moreover,compound2was isolated from the only natural source i.e.the root of Sesbania grandiflora by Noviany et al.[17].
Compound1was isolated as brick red crystalline solid,mp 233–235 °C.Elemental analysis along with the molecular ion peak at m/z 168.04[M]+⋅agreed with the molecular formula C8H8O4.The IR spectrum revealed characteristic absorption bands for hydroxyl group(3336 cm-1)and phenyl ring(1608 and 1489 cm-1).The presence of phenolic-OH group was further confirmed with the positive ferric chloride test.The IR spectrum also showed absorption bands at 3463 and 1685 cm-1corresponded to carboxyl group which was further confirmed by the appearance of effervescences with NaHCO3.The1H NMR spectrum indicated the presence of two ortho coupled doublets at δ 7.74 and 6.75 corresponding to the H-6 and H-5 aromatic protons,respectively.The downfield shift of proton H-6 is due to the presence of carboxylic group on adjacent carbon.The presence of two singlets at δ 10.06 and 9.67 integrating for two and one proton was corresponded to the two phenolic-OH and a carboxylic-OH,respectively.Moreover,a sharp singlet at δ 2.24 integrating for three protons indicates the presence of methyl group.The13C NMR spectrum exhibited peaks at δ 13.75 and178.43 which correspond to the presence of methyl and carbonyl carbon,respectively.Further,peaks at δ 148.0(C-1),128.3(C-2),158.60(C-3),158.69(C-4),127.98(C-5)and 114.90(C-6)showed the presence of six carbons of aromatic ring.In the light of above assignment and by comparing their spectral data and melting points with the reported literature[18],it was concluded that the compound1is 3,4-dihydroxy-2-methylbenzoic acid.
Compound2was obtained as white crystals,mp 207°C with a molecular formula of C20H14O2deduced from the positive ion ESIMS at m/z 286.10[M]+.Elemental analysis was also in good agreement with the molecular formula C20H14O2.The UV spectrum of the compound exhibited characteristic absorption band for aromatic nucleus displaying λmaxat 227,278 and 336 nmindicatingthe presence of a phenolic chromophore.The IR spectrum showed absorptions at 3425 cm-1indicating-OH group,at 3028 cm-1for aromatic C–H stretching and 1380–1615 cm-1for C=C stretching of aromatic rings.The positive response of compound to ferric chloride specifies the phenolic nature of hydroxyl group.The1H NMR spectrum displayed a singlet at δ 11.15 integrating for two protons corresponded to two hydroxyl group.Two independent ortho-coupled doublets with J=9 Hz at δ 7.24 and 7.85 integrating for two protons each corresponded to the H-3/3′and H-4/4′protons of the A ring of naphthalene.The H-5/5′and H-8/8′protons of B ring displayed double doublets with J=1.3 and 8.0 Hz at δ 7.94 and 7.12,respectively.There were two 3fold doublets at δ 7.38 and 7.44 corresponded to the remainingprotons H-6/6′and H-7/7′ofthe naphthylring B exhibiting two ortho-couplings(J=8.0 and 7.0 Hz)and onemeta-coupling(J=1.3 Hz)doublets,characteristicsfor the naphthyl ring.The13C NMR spectrum displayed characteristic peaks of naphthyl ring integrating around at δ 118.4–133.9.However,the carbon of the connected naphthyl rings showed peaks at δ 110.8 and the carbon with hydroxyl group substitution displayed peak at δ 154.8.In the light of above data it was significantly concluded that compound2is 2,2′-dihydroxy-1,1′-binaphthyl[17].The structure of compound2was further authenticated with the X-ray crystallographic analysis.
Compound3was isolated as orange coloured solid with mp of 267–269 °C.Elemental analysis along with the molecular ion peak at m/z 270.05[M]+⋅agreed with the molecular formula C15H10O5.The compound responded positively to the ferric chloride test indicating the presence of phenolic–OHgroup,which further confirmed with the broad peak at3510 cm-1inthe IRspectrum.The IR spectrum also displayed peak at 3056 and 2918 cm-1corresponded to aromatic and aliphatic C–H stretching vibrations.However,peaks at1676and1625 cm-1corresponded to C=OandC=C bonds of α,β-unsaturated carbonyl functionality.The1H NMR spectrum of compound showed four meta-coupled doublets at δ 7.81,7.65,7.30 and 7.09 corresponded to aromatic protons H-2,H-4,H-7 and H-5,respectively.Singletatδ12.13and12.02integrating for two and one protons,respectively,corresponded to hydroxyl protons.Moreover,sharp singlet at δ 2.46 integrating for three protons was assigned to methyl protons.The13C NMR spectrum exhibited peak for carbonyl carbons atδ182.0(C-9)and192.5(C-10),methyl carbon at δ 22.2,methyl substituted carbons at δ 149.3(C-3)and for hydroxyl substituted carbons at δ 162.4(C-1),160.3(C-6)and 162.6(C-8).The spectrum also showed eight more peaks for aromatic carbons at δ113.7(C-8a),121.3(C-7),119.9(C-5),133.8(C-5a),124.5(C-4),134.0(C-4a),136.9(C-2)and 111.8(C-1a).In the light of above data it was significantly concluded that compound3is 1,3,8-trihydroxy-6-methylanthracene-9,10-dione (Emodin)[19].
Compound4was furnished as shining light orange coloured crystals with mp 177°C.Elemental analysis along with the molecular ion peak at m/z 368.13[M]+⋅were in good agreement with the molecular formula C21H20O6.The IR spectrum showed characteristics peak for-OH at 3427 cm-1,aromatic and aliphatic C–H vibrations at 3065 and 2905 cm-1,respectively.The absorption peaks at 1682,1480–1605 and 1120 cm-1corresponded to C=O,C=C and C–O bands,respectively.The1H NMR spectrum exhibited doublets at δ 7.58,7.22,6.65 and 6.51 corresponded to H-1,H-2,H-6 and H-7,respectively.However,a sharp singlet at 6.72 was assigned to H-4 proton.The broad singlet at δ 11.12 and 10.75 were assigned to phenolic and enolic hydroxy groups,respectively.The aromatic protons of compound4showed orthocoupled doublets at δ 6.92,6.81 and singlet at δ 7.10 integrating for two protons each corresponded to H-5′/5′′,H-6′/6′′and H-2′/2′′,respectively.The methoxy group showed singlet at δ 3.85 integrating for six protons.The13C NMR spectrum exhibited peaks for aromatic carbons at δ 111.2,116.5,121.9,127.8,147.3 and 149.6 corresponded to C-2′/2′′,C-5′/5′′,C-6′/6′′,C-1′/1′′,C-3′/3′′and C-4′/4′′,respectively.Moreover,the straight chain of compound showed peak at δ 142.3 and 124.8 for C-1 and C-2,140.7 and 122.2 for C-7 and C-6,respectively.However,C-3,C-4 and C-5 displayed peaks at δ 182.4,100.1 and 180.3,respectively.In light of the above discussion and with comparison of the data to the reported literature[20],it was concluded that compound4is 5-hydroxy-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,4,6-trien-3-one i.e.Curcumin.The structure of compound4was also authenticated by X-ray crystallographic analysis.
Compound2and4,once isolated were found to be air stable and soluble in all common organic solvents but insoluble in water.X-ray crystallographic analysis revealed that compound2crystallized in the orthorhombic structure with Iba2 space group,while compound4crystallized in monoclinic crystal system with space group P2/n.These single crystal X-ray diffraction analysis of compounds2and4were in good agreement with the previous reports[21–23].Asymmetric unit of compound2and4with the ellipsoids drawn at the 50%probability level was shown in Figs.2 and 3,respectively.The crystal data and structure refinement parameters were summarized in Table 1.The bond lengths and bond angles of compound2and4were presented in Tables 2 and 3.The crystal structure of compound2was stabilised by the intermolecular(O–H…O)hydrogen bonding.The bond length of O1-C2 and O2-C12 was 1.375 and 1.351 A˚,respectively,showed partial double bond character due to the conjugation of lone pair of electrons of oxygen with naphthalene ring.The bond length between two naphthalene rings i.e.C1–C11 was 1.496 A˚.The dihedral angle between two naphthalene rings C2-C1-C11 and C1-C11-C12 were 120.2(4)oand 118.8(4)o,respectively.The crystal structure of compound4was stabilised by intramolecular(O–H…O)hydrogen bonding between O1H…O5,O4H…O6 and O3H…O2 and intermolecular(O–H…O and C–H…O)hydrogen bonds involving atoms O1H and H13 with atoms O3 and O5.The C–O bond lengths of O1-C2,O4-C17,O5-C1 and O6-C18 are in order of 1.36 A˚less than typical single C–O bonds as the lone pair of electron of oxygen comes in conjugation with benzene ring and thus the C–O bonds attain partial double bond character.However,the bond length of O5-C23 and O6-C21 were in order of 1.41 A˚and O2-C9 and O3-C11 had 1.29 and 1.28 A˚,respectively.The C8–C9 and C11-C12 showed single bond character with bond length of 1.45 A˚.However,C9–C10 and C10–C11 showed partial double band character with bond length of 1.38 and 1.40 A˚.The angles of C8/C9/C10,C9/C10/C11 and C10/C11/C12 were 121.39(12)o,120.62(12)oand 124.30(13)o,respectively.The dihedral angles of C6/C5/C7/C8 and C12/C13/C14/C19 were-4.6(2)oand 24.7(2)o,respectively.
To examine the influence of the intermolecular interactions on the molecular geometries we have performed DFT calculations of the equilibrium geometries of the free molecules starting with the experimental X-ray geometries.For the compound2,there was a good agreement between the experimental and calculated geometries(Table 2;Fig.4)with the largest difference occurring in the torsion angle C2-C1-C11-C12(7.3°),however this was not unexpected,since the rotation around a C–C single bond did not have a high energy cost[24].The situation was quite different for compound4.In the experimental geometry,there was a high degree of chemical symmetrization in the enol ring,defined as near equality of the C–C and C–O bond lengths compared pairwise,according to Herbstein et al.[25].The theoretical geometry did not display this symmetrization.One possible explanation for this discrepancy may be the O–H…O hydrogen bonds involving the oxygen atoms of the enol ring and hydroxyl groups,that linked different curcumin molecules(Table 3;Fig.5).
The acetylcholinesterase inhibition effect of the isolated compounds(1–4)was assessed by Ellman’s spectrophotometric method using human recombinant AChE with tacrine as reference compound.The result obtained has been summarized in Table 4.It can be inferred from the data shown in Table 4,that compound3,exhibited the strongest inhibition to AChE with an IC50value of 14.2 μM,followed by compound4(IC50=16.4 μM),2(IC50=21.9 μM)and1(IC50=23.7 μM).The results indicated that all the isolated compounds displayed moderate inhibitory activity against the acetylcholinesterase enzyme.However,compounds3and4were found to be more active in comparison to1and2.This was mainly attributed to the basic skeleton of compound3and4which provide them more binding prospects with the formation of hydrogen bonding interactions to the amino acid residues of the protein.However,the π–π stacking may also leads to improve its activity with the formation of additional nonbonding interactions to the protein.
The molecular docking studies were conducted in order to get insight the binding pattern and extent of binding of compounds with the target enzymes.In the present study,we have carried out the docking study of the two most potent acetylcholinestrerase inhibitor i.e.compounds3and4of the isolated compounds in order to anticipate the binding mode towards target enzyme(PDB:1EVE)and to give justification for the observed in vitro AChE inhibition property of the isolated compounds3and4.The in silico docking experiment for compounds3and4against the X-ray crystal structure of receptor(PDB:1EVE),wascarried out using PATCHDOCK and iGEMDOCK software.Docking simulations showed comparable binding affinity of compounds3and4with AChE enzyme.Several interactions from the docking pose were observed notably TYR121;SER122;LEU127;TYR130;GLU199;SER200;PHE330;PHE331 and HIS440 between the receptor and compound3;SER 122;SER226;CYS231;TRP233;PHE288;VAL323;LEU404 and HIS440 between the receptor and compound4in proper binding orientations.The binding score from iGEMDOCK was found to be-108.18 and-98.91 kcal/mol for compounds3and4,respectively.This is due to the cumulative van der Wall contribution and H-bonding interactions.The docking studies revealed that the aromatic ring also plays a major role in stabilizing the ligand-receptor complex by pi-cation interactions with amino acid residue of the target protein as shown in Fig.6.These strong interactions help the compounds to bury well inside the cavity of target protein and acts as a potent AChE inhibitor.The analysis of enzyme inhibition data obtained from the in vitro experiments,showed the comparative inhibitory property of compound3(IC50=14.2 μM)and compound4(IC50=16.4 μM)and found to be moderately potent compared to a standard drug tacrine(IC50=0.20 μM),as AChE inhibitor.The HB plot of the interacted residues in protein of AChE with compounds3and4was depicted in Fig.7.This plot helped us to study the way protein residues interacts with ligand.
Table 1 Crystal data and structure refinements of compound 2 and 4
Table 2 Comparison of selected geometrical parameters for compound 2 as determined by X-Ray diffraction and from the DFT geometry optimization(A˚,°)
Table 3 Comparison of selected geometrical parameters for compound 4 as determined by X-Ray diffraction and from the DFT geometry optimization(A˚,°)
The in vivo cytotoxicity of compounds(1–4)isolated from the leaves of C.lanceolata was evaluated to brine shrimp nauplii using vincristine sulfate as standard(Fig.S1†ESI).It is one of the most convenient methods to determine the cytotoxicity of any compound.The LD50value of compounds was reported in ppm units and summarized in Table 5.In the present study the LD50value of the compounds were found to be 23.40 μg/mL(compound1),17.78 μg/mL(compound2),13.80 μg/mL(compound3)and 11.66 μg/mL(compound4)as compared to the standard drug vincristine sulfate whose LD50was found to be 8.84 μg/mL.These data clearly signified the considerable cytotoxicity of all the isolated compounds(1–4).However,compound4showed most lethality to the brine shrimp than the other isolated compounds1–3,almost comparable to the standard drug.
All solvents and chemicals were purchased from commercial sources(Sigma-Aldrich,Merck,and others)and used as received or dried using standard procedures.Melting points were determined on a Kofler apparatus and are uncorrected.Elemental analysis(CHN)has been conducted using a Thermo Scientific(FLASH 2000)CHN Elemental Analyser.Fourier transform-infrared(FT-IR)spectra were recorded using a Perkin-Elmer(2000 FTIR)Spectrometer by the KBr pellet method,values are given in cm-1.The UV spectra were recorded with Perkin Elmer UV Win Lab spectrophotometer.1H and13C NMR spectra were run in CDCl3and DMSO-d6on Bruker Avance-II 400 and 100 MHz instruments,respectively.Mass spectra were recorded on a JEOL D-300 mass spectrometer.Thin-layer chromatography(TLC)glass plates were coated with silica gel(E-Merck G254)and exposed to iodine vapour to check the purity of the isolated compounds.
The leaves of C.lanceolata were collected from Abha region of South of Saudi Arabia and identified by Dr.S.Adeen,Taxonomist of the Medicinal,Aromatic and Poisonous Plant Research Centre(MAPPRC),College of Pharmacy,King Saud University,Riyadh,Saudi Arabia.A voucher specimen bearing number 14077 has been deposited in their herbarium.
The air-dried leaves of C.lanceolata were crushed to make powder(2.0 kg)and extracted exhaustively with 95%ethanol about three times under reflux temperature and filtered to yield a filtrate.The solvent was evaporated under reduced pressure to afford a crude extract and fractionated successively with petroleum ether,benzene,ethyl acetate and methanol.The petroleum ether and benzene extracts showed similar behaviour on TLC hence were mixed together.The mixed petroleum ether and benzene extract was chromatographed on a silica gel column,eluting stepwise with petroleum ether-benzene(1:0,9:1→1:9)which afforded compounds1and2.Similarly,the ethyl acetate extracts was subjected to column chromatography on silica gel,eluting stepwise with benzene-ethylacetate(1:0,9:1→1:9,0:1)which furnished two compounds i.e.compounds3and4.The isolated compounds were purified by repeated column chromatography followed by crystallization to get pure compounds.
3.4.1 3,4-Dihydroxy-2-methylbenzoic acid(1)
Brick red crystalline solid;mp 233–235 °C;IR(KBr)υmax3463,3336,3184,1685,1608,1489,1431,1264,1228,1173,1089,827 cm-1;1H NMR(DMSO d6,400 MHz)δ 10.06(2H,s,2× –OH),9.67(1H,s,-COOH),7.74(1H,d,J=8.0 Hz,H-6),6.75(1H,d,J=8.0 Hz,H-5),2.24(3H,s,–CH3);13C NMR(DMSO d6,100 MHz)δ 178.4(C,COOH),158.6(C,C-3),158.6(C,C-4),148.0(C,C-1),128.3(C,C-2),127.9(CH,C-5),114.9(CH,C-6),13.7(–CH3);ESIMS m/z 168.04[M]+⋅(C8H8O4);Anal.Calc.for C8H8O4:C,57.14;H,4.80;found:C,58.09;H,4.95.
3.4.2 2,2′-Dihydroxy-1,1′-binaphthyl(2)
White crystals;mp 207 °C;UV(MeOH) λmax227,278,336 nm;IR(KBr)υmax3425,3382,2971,2918,2840,1615,1590,1461,1380,1216,1175,1146,826,750 cm-1;1H NMR(CDCl3,400 MHz)δ 11.15(2H,s,2× OH),7.94(2H,dd,J=1.3 and 8.0 Hz,H-5 and H-5′),7.85(2H,d,J=9.0 Hz,H-4 and H-4′),7.44(2H,m,H-7 and H-7′),7.38(2H,m,H-6 and H-6′),7.24(2H,d,J=9.0 Hz,H-3 and H-3′),7.12(2H,dd,J=1.3 and 8.0 Hz,H-8 and H-8′);13C NMR(CDCl3,100 MHz) δ 154.3(C,C-2 and C-2′),133.9(C,C-8a and C-8′a),130.0(CH,C-4 and C-4′),129.2(C,C-4a and C-4′a),128.2(CH,C-5 and C-5′),126.9(CH,C-7 and C-7′),125.7(CH,C-6 and C-6′),123.5(CH,C-8 and C-8′),118.4(CH,C-3 and C-3′),110.8(C,C-1 and C-1′);ESIMS m/z 286.10[M]+⋅(C20H14O2);Anal.Calc.for C20H14O2:C,83.90;H,4.93;found:C,84.88;H,5.05.
3.4.3 1,3,8-Trihydroxy-6-methylanthracene-9,10-dione(3)Orange coloured crystals;mp 267–269 °C;IR(KBr)υmax3510,3056,2918,1676,1625,1565,1458,1371,1272,1205,1161,1082,1026,749 cm-1;1H NMR(CDCl3,400 MHz)δ 12.13(2H,s,2×OH),12.02(1H,s,OH),7.81(1H,d,J=1.2 Hz,H-2),7.65(1H,d,J=1.2 Hz,H-4),7.30(1H,d,J=1.2 Hz,H-7),7.09(1H,d,J=1.2 Hz,H-5),2.46(3H,s,–CH3);13C NMR(CDCl3,100 MHz)δ 192.5(C=O,C-10),182.0(C=O,C-9),162.6(C,C-8),162.4(C,C-1),160.3(C,C-6),149.3(C,C-3),136.9(CH,C-2),134.0(C,C-4a),133.8(C,C-5a),124.5(CH,C-4),121.3(CH,C-7),119.9(CH,C-5),113.7(C,C-8a),111.8(C,C-1a),22.2(CH3);ESIMS m/z 270.05[M]+⋅(C15H10O5);Anal.Calc.for C15H10O5:C,66.67;H,3.73;found:C,67.58;H,3.85.
3.4.4 5-Hydroxy-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,4,6-trien-3-one(4)
Yellow-orange coloured crystals;mp 177°C;IR(KBr)υmax3427,3065,2905,1682,1605,1480,1120 cm-1;1HNMR(CDCl3,400 MHz)δ 11.12(2H,s,2× -OH),10.75(1H,s,-OH),7.58(1H,d,H-1),7.22(1H,d,H-2),7.10(2H,s,H-2′and H-2′′),6.92(2H,d,J=8.0 Hz,H-5′and H-5′′),6.81(2H,d,J=8.0 Hz,H-6′and H-6′′),6.72(1H,s,H-4),6.65(1H,d,H-6),6.51(1H,d,H-7),3.85(6H,s,2×-OCH3);13C NMR(CDCl3,100 MHz)δ 182.4(C,C-3),180.3(C,C-5),149.6(C,C-4′and C-4′′),147.3(C,C-3′and C-3′′),142.3(CH,C-1),140.7(CH,C-7),127.8(C,C-1′and C-1′′),124.8(CH,C-2),122.2(CH,C-6),121.9(CH,C-6′and C-6′′),116.5(CH,C-5′and C-5′′),111.2(CH,C-2′and C-2′′),100.1(CH,C-4),55.6(2 × -OCH3);ESIMS m/z 368.13[M]+⋅(C21H20O6);Anal.Calc.for C21H20O6:C,68.47;H,5.47;found:C,69.81;H,5.85.
The crystal structures of the compounds2and4were determined by X-ray diffraction experiments performed on a Bruker Apex II diffractometer.The diffraction data was collected at room temperature 293(2)K using graphite monochromated Mo Kα (λ =0.71073 A˚).Data reduction was performed with APEX II[26].Lorentz and polarization corrections were applied.Absorption corrections were applied using SADABS[27].An extinction correction was applied during the refinement of the crystal structure of compound2[28].The crystallographic structures were solved using direct methods(SHELXS-97)[28].The structure refinements were carried out with SHELXL-97 software[28].The refinements were made by full-matrix least-squares on F2,with anisotropic displacement parameters for all non-hydrogen atoms.All the hydrogen atoms were located in a difference Fourier synthesis,placed at calculated positions and then,included in the structure factor calculation in a riding model using SHELXL-97 defaults with the exception of the hydrogen atoms bonded to hetero atoms,which were refined freely.MERCURY 3.3[29]was used for figure plotting.PLATON[30]was used for data analysis.Additional information to the structures determination is given in Table 1.Atomic coordinates,thermal parameters and bond lengths and angles have been deposited at the Cambridge Crystallographic Data Centre(CCDC)with reference numbers 1463766 and 1463767.
The geometry optimizations were performed using the GAMESS package[31],starting from the experimental X-ray geometries.The calculations were performed within density functional theory(DFT)using B3LYP(Becke three-parameter Lee–Yang–Parr)for exchange and correlation,which combines the hybrid exchange functional of Becke[32,33]with the correlation functional of Lee,Yang and Parr[34].The calculations were performed with an extended 6-311G(d,p)basis set.Tight conditions for convergence of both the self-consistent field cycles and the maximum density and energy gradient variations were imposed(10-5atomic units).At the end of each geometry optimization we conducted a Hessian calculation to guarantee that the final structure corresponds to a true minimum,using the same level of theory as in the geometry optimization.
All the isolated compounds(1–4)were assessed for AChE inhibition study by Ellman’s method[35,36].AChE stock solution was prepared by dissolving human recombinant AChE(EC:3.1.1.7)lyophilized powder(Sigma-Aldrich)in 0.1 M phosphate buffer(pH=8.0)containing Triton X-100(0.1%).Five increasing concentrations of test compounds were assayed to obtain %inhibition of the enzymatic activity in the range of 20–80.The assay solution consisted of a 0.1 M phosphate buffer pH 8.0,with the addition of 340 μM 5,50-dithio-bis(2-nitrobenzoic acid),0.02 unit per mL of human recombinant AChE from human serum and 550 μM of the substrate(acetylthiocholine iodide,ATCh).Increasing concentrations of the tested inhibitor were added to the assay solution and pre-incubated for 5 min at 37°C with the enzyme followed by the addition of the substrate.Initial rate assays were performed at 37°C using a Jasco V-530 double beam Spectrophotometer.The absorbance value at 412 nm was recorded for 5 min and enzyme activity was calculated from the slope of the obtained linear trend.Assays were carried out with a blank containing all components except AChE to account for the non-enzymatic reaction.The reaction rates were compared and the percent inhibition due to the presence of tested inhibitors was calculated.Each concentration was analysed in triplicate,and IC50values were determined graphically from log concentration-inhibition curves(GraphPad Prism 4.03 software,GraphPad Software Inc.).Tacrine was used as a standard inhibitor.
Docking simulations of compounds3and4were carried out according to the method described previously[37,38].The energy minimized structure of compounds3and4was sketched with ChemDraw Ultra(2D and 3D).The coordinates of compounds3and4was checked using PRODRG program[39]for generating molecular topologies.The three-dimensional structures of target protein function as a receptor(PDB:1EVE)and was retrieved from the protein data bank.All the heteroatoms coupled with proteins including water molecules,bound ligands and any co-crystallized solvent were discarded from the PDB file and the missing assignments like proper bonds,bond orders,hybridization and charges were assigned using the Molegro VirtualViewer[40].PATCHDOCK [41],iGEMDOCK[42]and Acceryl Discovery Studio 4.0 Client[43]were employed to evaluate the molecular docking,energy profile and visualization of compounds-receptor interactions,respectively.
Brine shrimp lethality bioassay is commonly used in the bioassay for the bioactive compounds[44,45].The in vivo cytotoxicity assay was performed on brine shrimp nauplii(Artemia salina)in accordance with the Mayer method[46].The egg of brine shrimp were hatched in a tank filled with artificially prepared sea water(brine,3.8%NaCl)exposed to incandescent light.Air was supplied at the bottom of the tank with the help of air supplier fitted with tube to keep the shrimps in uniform motion.The assay was performed 24 h after hatching and no food supplement was given during the hatching and experimentalperiods.A testsample(5.0 mg)was dissolved in 1 mL DMSO to obtain stock solution of 5 mg/mL.Different concentrations of test samples were obtained from stock solution and placed in separate vials,and the volume of each vial was made up to 5 mL with brine to obtain the desired final concentrations(10,20,40,60 and 80 μg/mL).The negative control was prepared in the same manner without the samples.Vincristine sulphate was used as a standard anti-cancer drug.Thirty brine shrimp nauplii were then placed in each vial.After 24 h of incubation,the vials were observed using a magnifying glass,and the number of survivors in each vial were counted and noted.The LD50values were calculated using the plot of percentage of mortality and logarithm of concentration.All tests were performed in triplicate and expressed as mean.
This is the first report of the isolation of these four compounds from Clutia lanceolata leaves viz.3,4-dihydroxy-2-methylbenzoic acid(1),2,2′-dihydroxy-1,1′-binaphthyl(2),1,3,8-trihydroxy-6-methylanthracene-9,10-dione (3)and 5-hydroxy-1,7-bis(4-hydroxy-3-methoxyphenyl)hepta-1,4,6-trien-3-one(4).Molecular structure of compounds2and4was authenticated unambiguously by X-ray crystallography and DFT studies.All the isolated compounds(1–4)showed significant activity for cytotoxicity and AChE inhibition assay.Compound4showed significant lethality to the brine shrimp nauplii.As far as AChE inhibition concerned,compounds3and4acted as potent enzyme inhibitors.Molecular docking study validated the binding pattern and extent of binding of compounds3and4with the target enzymes.
AcknowledgmentsFaheem Ahmad thanks the Chairman,Department of Chemistry,AMU,Aligarh,for providing necessary research facilities.UGC isalso gratefully acknowledged forresearch fellowship.
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Conflict of InterestThe authors declare no conflict of interest.
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1.R.L.A.Mahunnah,K.Mtotmwema,J.Econ.Tox.Bot.7,505(1985)
2.J.S.Mossa,J.M.Cassady,J.F.Kozlowski,T.M.Zennie,M.D.Antoun,M.G.Pellechia,A.T.McKenzie,S.R.Byrn,Tet.Lett.29,3627–3630(1988)
3.I.Muhammad,J.S.Mossa,M.A.Al-Yahya,H.H.Mirza,F.S.El-Feraly,A.T.Mcphail,Phytochemistry37,1377–1381(1994)
4.I.Muhammad-,J.S.Mossa,H.H.Mirza,F.S.El-Feraly,Phytochemistry50,1225–1227(1999)
5.I.Muhammad,J.S.Mossa,M.A.Al-Yahya,H.H.Mirza,F.S.El-Feraly,J.Nat.Prod.57,248–255(1994)
6.J.S.Mossa,J.M.Cassady,M.D.Antoun,S.R.Byrn,A.T.McKenzie,J.F.Kozlowski,P.Main,J.Org.Chem.50,916–918(1985)
7.J.S.Mossa,I.Muhammad,M.A.Al-Yahya,H.H.Mirza,F.S.El-Feraly,A.T.McPhail,J.Nat.Prod.59,224–231(1996)
8.R.D.Waigh,B.Zerihun,M.R.Euerby,Phytochemistry29,2935–2938(1990)
9.R.D.Waigh,B.M.Zerihun,D.J.Maitland,Phytochemistry30,333–335(1991)
10.B.Zerihun,G.B.Lockwood,R.D.Waigh,J.Nat.Prod.50,322(1986)
11.P.K.Chepkwony,M.Medina,M.Medina,US Pat.US 8,697,660 B2(2014)
12.F.Tutin,H.W.B.Clewer,J.Chem.Soc.Trans.101,2221–2234(1912)
13.Z.A.M.Baka,Arch.Phytopath.Plant Prot.43,736–743(2010)
14.J.S.Mossa,M.A.Al-Yahya,I.A.Al-Meshal,Medicinal plants of Saudi Arabia(King Saud University Press,Riyadh,2000)
15.M.Parveen,A.M.Malla,M.Alam,F.Ahmad,P.S.P.Silva,M.R.Silva,Nat.Prod.Res.28,646–652(2014)
16.M.Parveen,F.Ahmad,A.M.Malla,M.S.Khan,S.U.Rehman,M.Tabish,M.R.Silva,P.S.P.Silva,J.Photochem.Photobiol.B 159,218–228(2016)
17.Noviany,H.Osman,W.K.Chong,K.Awang,N.Manshoor,J.Basic Appl.Sci.8,253–256(2012)
18.A.J.Aladesanmi,S.A.Odediran,Fitoterapia 71,179–182(2000)
19.D.Nandani,R.N.Verma,A.Batra,Ann.Phytomed.2,96–104(2013)
20.M.Nabati,M.Mahkam,H.Heidari,Iran.Chem.Commun.2,236–243(2014)
21.F.Toda,K.Tanaka,H.Miyamoto,H.Koshima,I.Miyahara,K.Hirotsu,J.Chem.Soc.Perkin Trans.2,1877–1885(1997)
22.S.P.Parimita,Y.V.Ramshankar,S.Suresh,T.N.G.Row,Acta Crystallogr.E 63,o860–o862(2007)
23.P.Sanphui,N.R.Goud,U.B.R.Khandavilli,S.Bhanoth,A.Nangia,Chem.Commun.47,5013–5015(2011)
24.D.Buttar,M.H.Charlton,R.Docherty,J.Starbuck,J.Chem.Soc.Perkin Trans.2,763–772(1998)
25.F.H.Herbstein,B.B.Iversen,M.Kapon,F.K.Larsen,G.K.H.Madsen,G.M.Reisner,Acta Crystallogr.B 55,767–787(1999)
26.Bruker,APEX2 and SAINT,Bruker AXS Inc.,Madison,Wisconsin,USA(2003)
27.G.M.Sheldrick,SADABS(University of Gottingen,Germany,2003)
28.G.M.Sheldrick,Acta Crystallogr.A 64,112–122(2008)
29.C.F.Macrae,P.R.Edgington,P.McCabe,E.Pidcock,G.P.Shields,R.Taylor,M.Towler,M.van deStreek,J.Appl.Crystallogr.39,453–457(2006)
30.A.L.Spek,Acta Crystallogr.D 65,148–155(2009)
31.M.W.Schmidt,K.K.Baldrige,J.A.Boatz,S.T.Elbert,M.S.Gordon,J.J.Jensen,S.Koseki,N.Matsunaga,K.A.Nguyen,S.Sue,T.L.Windus,M.Dupuis,J.A.Montgomery,J.Comput.Chem.14,1347–1363(1993)
32.A.D.Becke,Phys.Rev.A 38,3098–3100(1988)
33.A.D.Becke,J.Chem.Phys.98,5648–5652(1993)
34.C.Lee,W.Yang,R.G.Parr,Phys.Rev.B 37,785–789(1988)
35.G.L.Ellman,K.D.Courtney,V.J.Andres,R.M.F.Stone,Biochem.Pharmacol.7,88–95(1961)
36.M.Parveen,F.Ahmad,A.M.Malla,S.Azaz,New J.Chem.39,2028–2041(2015)
37.F.Ahmad,M.Parveen,M.Alam,S.Azaz,A.M.Malla,M.J.Alam,D.U.Lee,S.Ahmad,J.Mol.Str.1116,317–332(2016)
38.M.Parveen,F.Ahmad,A.M.Malla,M.Alam,D.U.Lee,Catal.Lett.144,2091–2106(2014)
39.A.W.Schuttelkopf,D.M.F.V.Aalten,Acta.Crystallogr.D 60,1355–1363(2004)
40.R.Thomsen,M.H.Christensen,J.Med.Chem.49,3315–3321(2006)
41.D.S.Duhovny,Y.Inbar,R.Nussinov,H.J.Wolfson,Nucleic Acids Res.33,363–367(2005)
42.J.M.Yang,C.C.Chen,Proteins Struct.Funct.Bioinform.55,288–304(2004)
43.Accelrys Software Inc,Discovery Studio Modeling Environment Releaser 4.0(Accelrys Software Inc,SanDiego,2013)
44.G.X.Zhao,Y.H.Hui,J.K.Rupprecht,J.L.McLaughlin,K.V.Wood,J.Nat.Prod.55,347–356(1992)
45.I.J.Bulbul,Y.Begum,Sci.Res.J.2,15–20(2014)
46.B.N.Mayer,N.R.Ferrigni,J.E.Putnam,L.B.Jacobsen,D.E.Nichols,J.L.McLaughlin,Planta Med.45,31–34(1982)
8 September 2016/Accepted:8 October 2016/Published online:18 October 2016
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M.Parveen(✉)⋅F.Ahmad ⋅A.M.Malla⋅S.Azaz
Department of Chemistry,Aligarh Muslim University,Aligarh 202002,India
e-mail:mehtab.organic2009@gmail.com
M.Alam
Division of Bioscience,Dongguk University,Gyeongju 780-714,Republic of Korea
O.A.Basudan
Pharmacognosy,College of Pharmacy,King Saud University,Riyadh 4451,Saudi Arabia
M.R.Silva⋅P.S.Pereira Silva
CFisUC,Department of Physics,University of Coimbra,3004-516 Coimbra,Portugal
Natural Products and Bioprospecting2016年6期